Sanger Researchers ID 52 New Genetic Variations Linked to Osteoarthritis

January 21, 2019
Sanger Researchers ID 52 New Genetic Variations Linked to Osteoarthritis
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Researchers say they have discovered 52 new genetic changes linked to osteoarthritis, which doubles the number of genetic regions associated with the disorder. A team from the Wellcome Sanger Institute, GlaxoSmithKline, and colleagues analyzed the genomes of over 77,000 people with osteoarthritis and reported their findings (“Identification of new therapeutic targets for osteoarthritis through genome-wide analyses of UK Biobank data”) in Nature Genetics.

The scientists believe their study could help identify starting points for novel medicines and highlights opportunities for existing medicines to be evaluated in osteoarthritis.

“Osteoarthritis is the most common musculoskeletal disease and the leading cause of disability globally. Here, we performed a genome-wide association study for osteoarthritis (77,052 cases and 378,169 controls), analyzing four phenotypes: knee osteoarthritis, hip osteoarthritis, knee and/or hip osteoarthritis, and any osteoarthritis. We discovered 64 signals, 52 of them novel, more than doubling the number of established disease loci. Six signals fine-mapped to a single variant. We identified putative effector genes by integrating expression quantitative trait loci (eQTL) colocalization, fine-mapping, and human rare-disease, animal-model, and osteoarthritis tissue expression data,” write the investigators.

“We found enrichment for genes underlying monogenic forms of bone development diseases, and for the collagen formation and extracellular matrix organization biological pathways. Ten of the likely effector genes, including TGFB1 (transforming growth factor beta 1), FGF18 (fibroblast growth factor 18), CTSK (cathepsin K), and IL11(interleukin 11), have therapeutics approved or in clinical trials, with mechanisms of action supportive of evaluation for efficacy in osteoarthritis.”

According to Eleftheria Zeggini, PhD, previously from the Wellcome Sanger Institute and now based at Helmholtz Zentrum München in Germany, “Osteoarthritis is a very common, disabling disease with no cure. We have conducted the largest study of osteoarthritis to date, and found over 50 new genetic changes that increase the risk of developing osteoarthritis. This is a major step forward in developing treatments to help the millions of people suffering from the disease.”

To discover which genes cause osteoarthritis, the team incorporated additional functional genomic data and analyzed gene activity by measuring gene expression down to the protein level. The team integrated genetic and proteomic data on tissue taken from patients undergoing joint replacement surgery. By incorporating many different data sets, scientists were able to identify which genes were likely to be causal for osteoarthritis.

Ten of the genes were highlighted as targets of existing drugs, which are either in clinical development or approved for use against osteoarthritis and other diseases. These include the drugs INVOSSA, which is registered for knee osteoarthritis, and LCL-161, a drug in clinical development for the treatment of breast cancer, leukemia and myeloma. The team suggest that the ten drugs highlighted would be good candidates for testing in osteoarthritis.